BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB035H09SP1|AL430135
(914 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1542 1697 0.0
>3x_Contig1542
Length = 13810
Score = 1697 bits (855), Expect = 0.0
Identities = 897/906 (99%), Gaps = 6/906 (0%)
Strand = Plus / Plus
Query: 1 ttttgacattgctaccgattgcctctggttaccaccgttactaacacgggggttcgatgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 ttttgacattgctaccgattgcctctggttaccaccgttactaacacgggggttcgatgg 386
Query: 61 atcaataacgttgtccaaaactttagattcttcttgtagttcttggaaacttagccttga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 atcaataacgttgtccaaaactttagattcttcttgtagttcttggaaacttagccttga 446
Query: 121 agggaaaaggtttgtagaagattgtttattattgtcagaaccgttattttgattcaaacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 agggaaaaggtttgtagaagattgtttattattgtcagaaccgttattttgattcaaacc 506
Query: 181 taaggaatcctcaccatttatctcaactttgactcttgtattgttattttgcatttggtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 taaggaatcctcaccatttatctcaactttgactcttgtattgttattttgcatttggtt 566
Query: 241 tggacgtagtggaggcattggtgggggttgactgtaataaatagattctacattatcttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 tggacgtagtggaggcattggtgggggttgactgtaataaatagattctacattatcttc 626
Query: 301 atcttcacctaactgtccgatttgaccgtttgagatagatattcttcttcgtcttgggtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 atcttcacctaactgtccgatttgaccgtttgagatagatattcttcttcgtcttgggtt 686
Query: 361 aaacgaatccgttgccaatgcactctggaagataggtgggttggtcattggaaaatgtga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 aaacgaatccgttgccaatgcactctggaagataggtgggttggtcattggaaaatgtga 746
Query: 421 cgcgtcaaccccgaacggttggaagaaaggagatagtgattcctggatagaagggtccat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 cgcgtcaaccccgaacggttggaagaaaggagatagtgattcctggatagaagggtccat 806
Query: 481 taaactatgggtctgcatgtatgatgggaacatggcaaagttctgatttgccattctgct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 807 taaactatgggtctgcatgtatgatgggaacatggcaaagttctgatttgccattctgct 866
Query: 541 gtgaatatatttcgaagtttcttctgccagagagggaccatttccgaagttcagctcagc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 867 gtgaatatatttcgaagtttcttctgccagagagggaccatttccgaagttcagctcagc 926
Query: 601 tgcagatccttgtatcccggcaggatgatagttcacgttttgtgaaatttgtccaccttg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 927 tgcagatccttgtatcccggcaggatgatagttcacgttttgtgaaatttgtccaccttg 986
Query: 661 tacaggtgtttgtccgctagaatcacgatgtccgttggcattcacattacctgtagctgg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 987 tacaggtgtttgtccgctagaatcacgatgtccgttggcattcacattacctgtagctgg 1046
Query: 721 ggacactccagatgacgatggtgcagcaccaggaattcctgcctgagggtaattaggcac 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1047 ggacactccagatgacgatggtgcagcaccaggaattcctgcctgagggtaattaggcac 1106
Query: 781 accttgggatgctgggcccgccccagcaccgttcaaggaatcttgtggtac-mccaaaag 839
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1107 accttgggatgctgggcccgccccagcaccgttcaaggaatcttgtggtacacccaaaag 1166
Query: 840 atcttccgg-aaaggtatagatactccamc--gccccaggg-gttattg-tactgttatt 894
||||||||| |||||||||||||||||| | |||||||| ||||||| ||||||||||
Sbjct: 1167 atcttccggaaaaggtatagatactccaaccgcccccagggcgttattgttactgttatt 1226
Query: 895 catgtt 900
||||||
Sbjct: 1227 catgtt 1232
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6211
Number of Sequences: 1807
Number of extensions: 6211
Number of successful extensions: 50
Number of sequences better than 1.0e-20: 1
length of query: 914
length of database: 10,358,551
effective HSP length: 16
effective length of query: 898
effective length of database: 10,329,639
effective search space: 9276015822
effective search space used: 9276015822
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)